STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKK1Ankyrin repeat and kinase domain containing 1. (763 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor associated factor 6.
    
 0.753
TAB1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
   
 0.747
ENSCAPP00000007899
annotation not available
   
 0.738
ENSCAPP00000013360
annotation not available
   
0.738
CD247
CD247 molecule.
   
 0.734
MAP2K4
Mitogen-activated protein kinase kinase 4.
    
 0.705
MYD88
MYD88 innate immune signal transduction adaptor.
   
 0.700
TRADD
TNFRSF1A associated via death domain.
    
 0.695
ENSCAPP00000011090
annotation not available
    
 0.692
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.687
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.