STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PECAM1Platelet and endothelial cell adhesion molecule 1. (672 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.978
CDH5
Cadherin 5.
   
 0.977
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.970
KDR
Kinase insert domain receptor.
   
 0.920
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.904
JUP
Junction plakoglobin.
   
 0.860
FLT4
Fms related tyrosine kinase 4.
   
 0.826
F11R
F11 receptor.
   
 0.808
SELE
Selectin E.
   
 0.778
INPP5D
Inositol polyphosphate-5-phosphatase D.
    
 0.778
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.