STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PECAM1Platelet and endothelial cell adhesion molecule 1. (672 aa)    
Predicted Functional Partners:
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.996
CTNNB1
Catenin beta 1.
   
 0.993
CDH5
Cadherin 5.
   
 0.993
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.988
KDR
Kinase insert domain receptor.
   
 0.980
INPP5D
Inositol polyphosphate-5-phosphatase D.
    
  0.943
PLCG1
Phospholipase C gamma 1.
   
 0.942
SRC
SRC proto-oncogene, non-receptor tyrosine kinase.
   
 0.929
ENSCAPP00000013530
annotation not available
   
 0.929
ENSCAPP00000016316
annotation not available
   
 
 0.920
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.