ENSCAPP00000004409 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000004409

annotation not available (286 aa)

Predicted Functional Partners:

MYSM1

0.654

SLC35B4

0.552

CHID1

0.526

B4GALT7

0.477

CANX

0.432

DPM1

0.419

SLC35A2

0.414

SLC35C1

0.410

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B4GALT7	ENSCAPP00000004409	ENSCAPP00000004897	ENSCAPP00000004409	Beta-1,4-galactosyltransferase 7.	annotation not available	0.477
CANX	DPM1	ENSCAPP00000006501	ENSCAPP00000005946	Calnexin.	Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.	0.451
CANX	ENSCAPP00000004409	ENSCAPP00000006501	ENSCAPP00000004409	Calnexin.	annotation not available	0.432
CHID1	ENSCAPP00000004409	ENSCAPP00000006862	ENSCAPP00000004409	Chitinase domain containing 1.	annotation not available	0.526
CHID1	SLC35B4	ENSCAPP00000006862	ENSCAPP00000008209	Chitinase domain containing 1.	Solute carrier family 35 member B4.	0.563
DPM1	CANX	ENSCAPP00000005946	ENSCAPP00000006501	Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.	Calnexin.	0.451
DPM1	ENSCAPP00000004409	ENSCAPP00000005946	ENSCAPP00000004409	Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.	annotation not available	0.419
DPM1	MYSM1	ENSCAPP00000005946	ENSCAPP00000004064	Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.	Myb like, SWIRM and MPN domains 1.	0.401
ENSCAPP00000004409	B4GALT7	ENSCAPP00000004409	ENSCAPP00000004897	annotation not available	Beta-1,4-galactosyltransferase 7.	0.477
ENSCAPP00000004409	CANX	ENSCAPP00000004409	ENSCAPP00000006501	annotation not available	Calnexin.	0.432
ENSCAPP00000004409	CHID1	ENSCAPP00000004409	ENSCAPP00000006862	annotation not available	Chitinase domain containing 1.	0.526
ENSCAPP00000004409	DPM1	ENSCAPP00000004409	ENSCAPP00000005946	annotation not available	Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.	0.419
ENSCAPP00000004409	MYSM1	ENSCAPP00000004409	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.654
ENSCAPP00000004409	SLC35A2	ENSCAPP00000004409	ENSCAPP00000013094	annotation not available	Solute carrier family 35 member A2.	0.414
ENSCAPP00000004409	SLC35B4	ENSCAPP00000004409	ENSCAPP00000008209	annotation not available	Solute carrier family 35 member B4.	0.552
ENSCAPP00000004409	SLC35C1	ENSCAPP00000004409	ENSCAPP00000016317	annotation not available	Solute carrier family 35 member C1.	0.410
MYSM1	DPM1	ENSCAPP00000004064	ENSCAPP00000005946	Myb like, SWIRM and MPN domains 1.	Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.	0.401
MYSM1	ENSCAPP00000004409	ENSCAPP00000004064	ENSCAPP00000004409	Myb like, SWIRM and MPN domains 1.	annotation not available	0.654
SLC35A2	ENSCAPP00000004409	ENSCAPP00000013094	ENSCAPP00000004409	Solute carrier family 35 member A2.	annotation not available	0.414
SLC35A2	SLC35B4	ENSCAPP00000013094	ENSCAPP00000008209	Solute carrier family 35 member A2.	Solute carrier family 35 member B4.	0.532