Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD1ECD1e molecule. (351 aa)    
Predicted Functional Partners:
ENSCAPP00000009115
annotation not available
   
 
  0.868
CD207
CD207 molecule.
   
  
 0.798
ENSCAPP00000001550
annotation not available
   
 0.712
CD68
CD68 molecule.
    
 0.683
CD83
CD83 molecule.
      
 0.667
CD5
CD5 molecule.
      
 0.659
H2AZ2
H2A.Z variant histone 2.
   
 
 0.633
ENSCAPP00000005717
annotation not available
  
  
 0.631
SASS6
SAS-6 centriolar assembly protein.
    
 0.602
IFNG
Interferon gamma.
  
  
 0.602
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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