STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN2Actinin alpha 2. (895 aa)    
Predicted Functional Partners:
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
  0.999
VCL
Vinculin.
   
 0.979
TNNI1
Troponin I1, slow skeletal type.
   
 0.970
CSRP3
Cysteine and glycine rich protein 3.
   
 
 0.954
ACTN4
Actinin alpha 4.
   
 0.931
ACTN1
Actinin alpha 1.
   
 0.928
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
   
 0.927
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.927
ENSCAPP00000009598
annotation not available
   
 0.927
ENSCAPP00000011751
annotation not available
    
 
 0.923
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.