STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABIN1Calcineurin binding protein 1. (2031 aa)    
Predicted Functional Partners:
MEF2B
Myocyte enhancer factor 2B.
    
 
 0.966
HIRA
Histone cell cycle regulator.
    
 0.965
UBN1
Ubinuclein 1.
   
 0.963
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.954
ENSCAPP00000000576
annotation not available
   
  0.940
ENSCAPP00000004781
annotation not available
   
  0.940
ASF1B
Anti-silencing function 1B histone chaperone.
    
 0.879
MEF2D
Myocyte enhancer factor 2D.
    
 
 0.739
GLE1
GLE1 RNA export mediator.
    
 0.701
FRAS1
Fraser extracellular matrix complex subunit 1.
    
 0.699
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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