Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004425annotation not available (763 aa)    
Predicted Functional Partners:
ENSCAPP00000015332
annotation not available
   
 0.937
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.924
ENSCAPP00000003691
annotation not available
   
 0.908
ENSCAPP00000014392
annotation not available
   
 0.908
DHX9
DExH-box helicase 9.
   
 0.903
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.895
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.894
ENSCAPP00000006614
annotation not available
   
 0.881
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
   
   0.862
YBX1
Y-box binding protein 1.
   
 0.860
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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