STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM7Zinc finger SWIM-type containing 7. (122 aa)    
Predicted Functional Partners:
ATM
ATM serine/threonine kinase.
     
 0.929
POLD1
DNA polymerase delta 1, catalytic subunit.
     
 0.919
ENSCAPP00000013163
annotation not available
   
 
  0.908
BARD1
BRCA1 associated RING domain 1.
   
 
  0.906
HFM1
Helicase for meiosis 1.
     
 0.802
POLE
DNA polymerase epsilon, catalytic subunit.
     
 0.655
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
     
 0.635
ELOF1
Elongation factor 1 homolog.
      
 0.481
ENSCAPP00000014426
annotation not available
    
   0.474
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.