Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNMA1PNMA family member 1. (353 aa)    
Predicted Functional Partners:
PNMA8A
PNMA family member 8A.
   
 
 0.846
RPA1
Replication protein A1.
    
 0.760
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.730
IL20RA
Interleukin 20 receptor subunit alpha.
     
  0.707
IL20
Interleukin 20.
     
  0.705
ENSCAPP00000010490
annotation not available
     
 0.702
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.669
ASB5
Ankyrin repeat and SOCS box containing 5.
    
 0.667
SUV39H2
Suppressor of variegation 3-9 homolog 2.
   
 0.662
ENSCAPP00000010518
annotation not available
    
 0.652
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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