STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGB1Golgin B1. (3148 aa)    
Predicted Functional Partners:
GOSR1
Golgi SNAP receptor complex member 1.
   
 0.967
STX5
Syntaxin 5.
    
 0.965
ENSCAPP00000009931
annotation not available
   
 
 0.964
USO1
USO1 vesicle transport factor.
   
 0.962
ACBD3
acyl-CoA binding domain containing 3.
    
 0.885
ACTR2
Actin related protein 2.
   
 0.819
TJP1
Tight junction protein 1.
    
 0.774
WASL
WASP like actin nucleation promoting factor.
   
 0.735
WAS
WASP actin nucleation promoting factor.
   
 0.735
ENSCAPP00000005436
annotation not available
  
 0.721
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.