Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD151CD151 molecule (Raph blood group). (252 aa)    
Predicted Functional Partners:
ITGA3
Integrin subunit alpha 3.
    
 0.985
ITGB1
Integrin subunit beta 1.
   
 0.978
ITGB4
Integrin subunit beta 4.
    
 0.974
GRAMD1C
GRAM domain containing 1C.
    
   0.959
ITGA6
Integrin subunit alpha 6.
    
 0.948
CD9
CD9 molecule.
    
 0.932
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.925
ITGA7
Integrin subunit alpha 7.
    
 0.721
EZR
Ezrin.
    
 
 0.708
COL18A1
Collagen type XVIII alpha 1 chain.
     
 0.687
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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