STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004459annotation not available (815 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.868
ENSCAPP00000017855
annotation not available
    
 0.866
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.861
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.850
ENSCAPP00000007721
annotation not available
    
 0.831
ENSCAPP00000001161
annotation not available
   
 0.828
SF3B1
Splicing factor 3b subunit 1.
   
 0.826
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.824
SYMPK
Symplekin.
    
 0.814
ENSCAPP00000015332
annotation not available
   
 0.814
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.