RCN2 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RCN2

Reticulocalbin 2. (221 aa)

Predicted Functional Partners:

TSPAN3

0.605

NPTXR

0.597

ENSCAPP00000014267

0.507

ENSCAPP00000007150

0.472

CALR3

0.472

CALR

0.472

DNAJC10

0.462

STK40

0.462

ENSCAPP00000001068

0.438

PEAK1

0.431

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALR	DNAJC10	ENSCAPP00000018006	ENSCAPP00000002884	Calreticulin.	DnaJ heat shock protein family (Hsp40) member C10.	0.830
CALR	ENSCAPP00000001068	ENSCAPP00000018006	ENSCAPP00000001068	Calreticulin.	annotation not available	0.981
CALR	ENSCAPP00000007150	ENSCAPP00000018006	ENSCAPP00000007150	Calreticulin.	annotation not available	0.820
CALR	RCN2	ENSCAPP00000018006	ENSCAPP00000004461	Calreticulin.	Reticulocalbin 2.	0.472
CALR3	DNAJC10	ENSCAPP00000017253	ENSCAPP00000002884	Calreticulin 3.	DnaJ heat shock protein family (Hsp40) member C10.	0.830
CALR3	ENSCAPP00000001068	ENSCAPP00000017253	ENSCAPP00000001068	Calreticulin 3.	annotation not available	0.978
CALR3	RCN2	ENSCAPP00000017253	ENSCAPP00000004461	Calreticulin 3.	Reticulocalbin 2.	0.472
DNAJC10	CALR	ENSCAPP00000002884	ENSCAPP00000018006	DnaJ heat shock protein family (Hsp40) member C10.	Calreticulin.	0.830
DNAJC10	CALR3	ENSCAPP00000002884	ENSCAPP00000017253	DnaJ heat shock protein family (Hsp40) member C10.	Calreticulin 3.	0.830
DNAJC10	ENSCAPP00000001068	ENSCAPP00000002884	ENSCAPP00000001068	DnaJ heat shock protein family (Hsp40) member C10.	annotation not available	0.999
DNAJC10	ENSCAPP00000007150	ENSCAPP00000002884	ENSCAPP00000007150	DnaJ heat shock protein family (Hsp40) member C10.	annotation not available	0.830
DNAJC10	RCN2	ENSCAPP00000002884	ENSCAPP00000004461	DnaJ heat shock protein family (Hsp40) member C10.	Reticulocalbin 2.	0.462
ENSCAPP00000001068	CALR	ENSCAPP00000001068	ENSCAPP00000018006	annotation not available	Calreticulin.	0.981
ENSCAPP00000001068	CALR3	ENSCAPP00000001068	ENSCAPP00000017253	annotation not available	Calreticulin 3.	0.978
ENSCAPP00000001068	DNAJC10	ENSCAPP00000001068	ENSCAPP00000002884	annotation not available	DnaJ heat shock protein family (Hsp40) member C10.	0.999
ENSCAPP00000001068	ENSCAPP00000007150	ENSCAPP00000001068	ENSCAPP00000007150	annotation not available	annotation not available	0.981
ENSCAPP00000001068	RCN2	ENSCAPP00000001068	ENSCAPP00000004461	annotation not available	Reticulocalbin 2.	0.438
ENSCAPP00000001068	STK40	ENSCAPP00000001068	ENSCAPP00000007405	annotation not available	Serine/threonine kinase 40.	0.468
ENSCAPP00000007150	CALR	ENSCAPP00000007150	ENSCAPP00000018006	annotation not available	Calreticulin.	0.820
ENSCAPP00000007150	DNAJC10	ENSCAPP00000007150	ENSCAPP00000002884	annotation not available	DnaJ heat shock protein family (Hsp40) member C10.	0.830