STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF385BZinc finger protein 385B. (477 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
  0.689
BOLL
Boule homolog, RNA binding protein.
    
  0.583
ENSCAPP00000002338
annotation not available
    
 
 0.573
GNG4
G protein subunit gamma 4.
      
 0.569
SPON1
Spondin 1.
      
 0.569
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
ENSCAPP00000004791
annotation not available
    
 
 0.548
ZBTB20
Zinc finger and BTB domain containing 20.
      
 0.528
VSTM2L
V-set and transmembrane domain containing 2 like.
      
 0.524
MRPL33
Mitochondrial ribosomal protein L33.
    
 
 0.516
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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