Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THSD7AThrombospondin type 1 domain containing 7A. (1427 aa)    
Predicted Functional Partners:
PLA2R1
Phospholipase A2 receptor 1.
    
 0.794
ENSCAPP00000008308
annotation not available
      
 0.661
UNC5B
Unc-5 netrin receptor B.
      
 0.639
KCMF1
Potassium channel modulatory factor 1.
      
 0.635
SEMA3B
Semaphorin 3B.
     
 0.626
TMUB2
Transmembrane and ubiquitin like domain containing 2.
    
   0.622
CDH6
Cadherin 6.
    
 
 0.621
PCSK2
Proprotein convertase subtilisin/kexin type 2.
      
 0.607
ADAMTS13
ADAM metallopeptidase with thrombospondin type 1 motif 13.
     
 0.588
ENSCAPP00000013077
annotation not available
      
 0.580
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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