MBL2 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

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Coexpression

Experiments

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[Homology]

Score

MBL2

Mannose binding lectin 2. (206 aa)

Predicted Functional Partners:

ENSCAPP00000009206

0.998

ENSCAPP00000009416

0.997

FCN1

0.966

ENSCAPP00000018120

0.953

SERPING1

0.949

C1S

0.946

C1R

0.945

C1RL

0.927

PLAU

0.923

F7

0.921

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1R	C1RL	ENSCAPP00000003652	ENSCAPP00000004041	Complement C1r.	Complement C1r subcomponent like.	0.885
C1R	C1S	ENSCAPP00000003652	ENSCAPP00000003535	Complement C1r.	Complement C1s.	0.999
C1R	ENSCAPP00000018120	ENSCAPP00000003652	ENSCAPP00000018120	Complement C1r.	annotation not available	0.969
C1R	FCN1	ENSCAPP00000003652	ENSCAPP00000001167	Complement C1r.	Ficolin 1.	0.960
C1R	MBL2	ENSCAPP00000003652	ENSCAPP00000004472	Complement C1r.	Mannose binding lectin 2.	0.945
C1R	SERPING1	ENSCAPP00000003652	ENSCAPP00000005465	Complement C1r.	Serpin family G member 1.	0.999
C1RL	C1R	ENSCAPP00000004041	ENSCAPP00000003652	Complement C1r subcomponent like.	Complement C1r.	0.885
C1RL	C1S	ENSCAPP00000004041	ENSCAPP00000003535	Complement C1r subcomponent like.	Complement C1s.	0.997
C1RL	ENSCAPP00000009416	ENSCAPP00000004041	ENSCAPP00000009416	Complement C1r subcomponent like.	annotation not available	0.765
C1RL	ENSCAPP00000018120	ENSCAPP00000004041	ENSCAPP00000018120	Complement C1r subcomponent like.	annotation not available	0.928
C1RL	FCN1	ENSCAPP00000004041	ENSCAPP00000001167	Complement C1r subcomponent like.	Ficolin 1.	0.730
C1RL	MBL2	ENSCAPP00000004041	ENSCAPP00000004472	Complement C1r subcomponent like.	Mannose binding lectin 2.	0.927
C1RL	SERPING1	ENSCAPP00000004041	ENSCAPP00000005465	Complement C1r subcomponent like.	Serpin family G member 1.	0.982
C1S	C1R	ENSCAPP00000003535	ENSCAPP00000003652	Complement C1s.	Complement C1r.	0.999
C1S	C1RL	ENSCAPP00000003535	ENSCAPP00000004041	Complement C1s.	Complement C1r subcomponent like.	0.997
C1S	ENSCAPP00000018120	ENSCAPP00000003535	ENSCAPP00000018120	Complement C1s.	annotation not available	0.968
C1S	FCN1	ENSCAPP00000003535	ENSCAPP00000001167	Complement C1s.	Ficolin 1.	0.947
C1S	MBL2	ENSCAPP00000003535	ENSCAPP00000004472	Complement C1s.	Mannose binding lectin 2.	0.946
C1S	SERPING1	ENSCAPP00000003535	ENSCAPP00000005465	Complement C1s.	Serpin family G member 1.	0.999
ENSCAPP00000009206	ENSCAPP00000009416	ENSCAPP00000009206	ENSCAPP00000009416	annotation not available	annotation not available	0.997