Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDC42SE1CDC42 small effector 1. (79 aa)    
Predicted Functional Partners:
CDC42EP4
CDC42 effector protein 4.
      
 0.829
BAIAP2L1
BAR/IMD domain containing adaptor protein 2 like 1.
      
 0.748
CDC42EP3
CDC42 effector protein 3.
      
 0.747
CDC42BPB
CDC42 binding protein kinase beta.
      
 0.727
FLII
FLII actin remodeling protein.
      
 0.667
ENSCAPP00000009712
annotation not available
    
 
 0.662
ENSCAPP00000013934
annotation not available
    
 
 0.662
ENSCAPP00000001689
annotation not available
      
 0.651
ENSCAPP00000008507
annotation not available
   
  
 0.588
BAIAP2
BAR/IMD domain containing adaptor protein 2.
      
 0.576
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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