STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42SE1CDC42 small effector 1. (79 aa)    
Predicted Functional Partners:
CDC42EP4
CDC42 effector protein 4.
      
 0.560
BAIAP2L1
BAR/IMD domain containing adaptor protein 2 like 1.
      
 0.554
CDC42BPB
CDC42 binding protein kinase beta.
      
 0.552
ENSCAPP00000001689
annotation not available
      
 0.541
FLII
FLII actin remodeling protein.
      
 0.524
ENSCAPP00000009712
annotation not available
    
 
 0.449
ENSCAPP00000013934
annotation not available
    
 
 0.449
SYNGAP1
Synaptic Ras GTPase activating protein 1.
      
 0.435
BAIAP2
BAR/IMD domain containing adaptor protein 2.
      
 0.424
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.