STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIP6Thyroid hormone receptor interactor 6. (480 aa)    
Predicted Functional Partners:
LIMD1
LIM domains containing 1.
    
 0.955
LPAR2
Lysophosphatidic acid receptor 2.
    
 0.931
ENSCAPP00000012533
annotation not available
    
  0.917
PDLIM4
PDZ and LIM domain 4.
   
 
 0.916
NOS1AP
Nitric oxide synthase 1 adaptor protein.
    
 
 0.890
BCAR1
BCAR1 scaffold protein, Cas family member.
    
 0.845
ENSCAPP00000004291
annotation not available
    
 
 0.842
GATA1
GATA binding protein 1.
    
   0.830
TTLL12
Tubulin tyrosine ligase like 12.
   
   0.797
PRKAA2
Protein kinase AMP-activated catalytic subunit alpha 2.
    
   0.793
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.