STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BLOC1S2Biogenesis of lysosomal organelles complex 1 subunit 2. (78 aa)    
Predicted Functional Partners:
ENSCAPP00000014786
annotation not available
    
 0.999
ENSCAPP00000015379
annotation not available
    
 0.999
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.999
ENSCAPP00000017524
annotation not available
   
 0.999
ENSCAPP00000010818
annotation not available
   
 0.997
ENSCAPP00000011392
annotation not available
   
 0.997
BORCS5
BLOC-1 related complex subunit 5.
   
 0.996
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
     
 0.962
SNX7
Sorting nexin 7.
    
 
 0.961
SNAP25
Synaptosome associated protein 25.
   
 
 0.954
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.