STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB1ARAB1A, member RAS oncogene family. (159 aa)    
Predicted Functional Partners:
RAB1B
RAB1B, member RAS oncogene family.
  
 
0.979
TRAPPC1
Trafficking protein particle complex 1.
    
 0.965
ENSCAPP00000017935
annotation not available
    
 0.958
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.955
TRAPPC5
Trafficking protein particle complex 5.
    
 0.951
TRAPPC6A
Trafficking protein particle complex 6A.
    
 0.948
GDI1
GDP dissociation inhibitor 1.
   
 0.941
GDI2
GDP dissociation inhibitor 2.
   
 0.941
ENSCAPP00000007397
annotation not available
   
 0.931
TRAPPC3L
Trafficking protein particle complex 3 like.
   
 0.931
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.