Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB1ARAB1A, member RAS oncogene family. (159 aa)    
Predicted Functional Partners:
RAB1B
RAB1B, member RAS oncogene family.
   
  0.999
RAB7A
RAB7A, member RAS oncogene family.
   
  0.989
USO1
USO1 vesicle transport factor.
   
 0.983
RAB8A
RAB8A, member RAS oncogene family.
   
  0.976
STX5
Syntaxin 5.
   
 0.973
TBC1D20
TBC1 domain family member 20.
    
 0.969
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.954
ENSCAPP00000017935
annotation not available
    
 0.950
GDI1
GDP dissociation inhibitor 1.
   
 0.948
GDI2
GDP dissociation inhibitor 2.
   
 0.948
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.