Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYBACytochrome b-245 alpha chain. (184 aa)    
Predicted Functional Partners:
ENSCAPP00000000633
annotation not available
   
 0.999
NCF4
Neutrophil cytosolic factor 4.
   
 0.999
NOXO1
NADPH oxidase organizer 1.
    
 0.997
NOX3
NADPH oxidase 3.
   
 0.996
NCF2
Neutrophil cytosolic factor 2.
   
 0.992
ENSCAPP00000008459
annotation not available
   
 0.988
ENSCAPP00000003355
annotation not available
   
 0.985
RAC2
Rac family small GTPase 2.
   
 0.982
DUOX1
Dual oxidase 1.
   
 0.981
RAC1
Rac family small GTPase 1.
   
 0.976
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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