Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004504annotation not available (88 aa)    
Predicted Functional Partners:
PTGES3
Prostaglandin E synthase 3.
   
 0.965
SNIP1
Smad nuclear interacting protein 1.
    
  0.957
PNISR
PNN interacting serine and arginine rich protein.
   
 0.938
STIP1
Stress induced phosphoprotein 1.
  
 0.905
AHSA1
Activator of HSP90 ATPase activity 1.
   
 
 0.887
ENSCAPP00000016105
annotation not available
   
 
 0.887
SLU7
SLU7 homolog, splicing factor.
   
 0.886
ENSCAPP00000013611
annotation not available
   
 0.881
SRSF11
Serine and arginine rich splicing factor 11.
   
  0.875
PNN
Pinin, desmosome associated protein.
   
 0.868
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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