STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAX2Ventral anterior homeobox 2. (233 aa)    
Predicted Functional Partners:
ENSCAPP00000015731
annotation not available
     
  0.798
ENSCAPP00000009388
annotation not available
     
  0.758
PHACTR4
Phosphatase and actin regulator 4.
      
 0.743
ENSCAPP00000006743
annotation not available
    
   0.656
PAX2
Paired box 2.
    
 0.650
PAX5
Paired box 5.
    
 0.650
ENSCAPP00000003082
annotation not available
      
 0.579
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 
 0.576
REL
REL proto-oncogene, NF-kB subunit.
      
 0.568
VSX2
Visual system homeobox 2.
   
  
 0.546
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.