STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TKFCTriokinase and FMN cyclase. (581 aa)    
Predicted Functional Partners:
ALDOB
Aldolase, fructose-bisphosphate B.
   
 
 0.971
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
 
 0.966
ENSCAPP00000018027
annotation not available
    
 0.958
ALDOC
Aldolase, fructose-bisphosphate C.
   
 
 0.934
ENSCAPP00000018403
annotation not available
   
 
 0.934
IFIH1
Interferon induced with helicase C domain 1.
    
 0.929
GNPAT
Glyceronephosphate O-acyltransferase.
     
  0.911
SORD
Sorbitol dehydrogenase.
  
 0.900
GLYCTK
Glycerate kinase.
  
  
 0.888
GPD1L
Glycerol-3-phosphate dehydrogenase 1 like.
     
 0.875
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.