Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBE2J1Ubiquitin conjugating enzyme E2 J1. (228 aa)    
Predicted Functional Partners:
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.999
ENSCAPP00000003228
annotation not available
    
 0.998
OS9
OS9 endoplasmic reticulum lectin.
   
 0.989
ERLEC1
Endoplasmic reticulum lectin 1.
   
 0.984
VCP
Valosin containing protein.
    
 0.977
AMFR
Autocrine motility factor receptor.
    
 0.976
ENSCAPP00000016519
annotation not available
   
 0.972
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 0.946
ENSCAPP00000017642
annotation not available
   
 
 0.939
ENSCAPP00000001899
annotation not available
    
  0.936
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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