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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2J1Ubiquitin conjugating enzyme E2 J1. (228 aa)    
Predicted Functional Partners:
ENSCAPP00000002614
annotation not available
    
 0.997
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
    
 0.997
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
   
 0.960
UBE2G1
Ubiquitin conjugating enzyme E2 G1.
     
 0.913
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.865
UBE2J2
Ubiquitin conjugating enzyme E2 J2.
    
0.864
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 0.863
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
    
 0.849
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.828
UBA5
Ubiquitin like modifier activating enzyme 5.
   
 0.817
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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