Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MFSD2BMajor facilitator superfamily domain containing 2B. (471 aa)    
Predicted Functional Partners:
SPNS2
Sphingolipid transporter 2.
      
 0.946
UBXN6
UBX domain protein 6.
     
  0.833
NSFL1C
NSFL1 cofactor.
     
  0.833
UBXN2B
UBX domain protein 2B.
     
  0.699
TYMS
Thymidylate synthetase.
    
  0.689
TK1
Thymidine kinase 1.
    
  0.678
CSTF3
Cleavage stimulation factor subunit 3.
    
  0.673
SPNS1
Sphingolipid transporter 1 (putative).
    
 0.673
ENSCAPP00000004250
annotation not available
    
 0.606
ENSCAPP00000006029
annotation not available
    
 0.606
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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