STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004532annotation not available (290 aa)    
Predicted Functional Partners:
CYP1A2
Cytochrome P450 family 1 subfamily A member 2.
   
 
 0.852
CYP2E1
Cytochrome P450 family 2 subfamily E member 1.
     
 0.841
XDH
Xanthine dehydrogenase.
   
 
 0.824
ENSCAPP00000013132
annotation not available
    
 0.814
CYP1A1
Cytochrome P450 family 1 subfamily A member 1.
   
 
 0.732
FAM78A
Family with sequence similarity 78 member A.
    
 0.709
WDR18
WD repeat domain 18.
   
 0.706
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
 0.689
TEX10
Testis expressed 10.
    
 0.655
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
  0.654
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.