Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004536annotation not available (186 aa)    
Predicted Functional Partners:
ENSCAPP00000002246
annotation not available
    
 
 0.969
PPP2R5C
Protein phosphatase 2 regulatory subunit B'gamma.
    
 
 0.936
CBX1
Chromobox 1.
    
 
 0.922
PPP2R5A
Protein phosphatase 2 regulatory subunit B'alpha.
    
   0.921
ENSCAPP00000010940
annotation not available
    
 
 0.861
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
   0.845
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
   0.845
PPP2R5D
Protein phosphatase 2 regulatory subunit B'delta.
    
 
 0.819
ENSCAPP00000007198
annotation not available
    
 
 0.815
ENSCAPP00000005471
annotation not available
    
   0.812
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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