Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004538annotation not available (450 aa)    
Predicted Functional Partners:
GM2A
GM2 ganglioside activator.
   
 0.993
NAGA
alpha-N-acetylgalactosaminidase.
  
 
 0.970
ENSCAPP00000015528
annotation not available
     
 0.960
B4GALNT1
beta-1,4-N-acetyl-galactosaminyltransferase 1.
     
 0.959
NEU3
Neuraminidase 3.
     
 0.959
GLB1
Galactosidase beta 1.
  
 
 0.955
NEU1
Neuraminidase 1.
  
 0.955
ENSCAPP00000005689
annotation not available
  
 0.940
ENSCAPP00000008344
annotation not available
   
 
 0.939
ARSA
Arylsulfatase A.
  
 0.937
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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