Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIMD2LIM domain containing 2. (78 aa)    
Predicted Functional Partners:
ENSCAPP00000010970
annotation not available
      
 0.750
MRPL35
Mitochondrial ribosomal protein L35.
      
 0.573
MRPS11
Mitochondrial ribosomal protein S11.
      
 0.571
STK4
Serine/threonine kinase 4.
    
  0.543
STK3
Serine/threonine kinase 3.
    
  0.543
MPP7
Membrane palmitoylated protein 7.
      
 0.517
MTRF1
Mitochondrial translation release factor 1.
      
 0.509
TMEM160
Transmembrane protein 160.
      
 0.508
GRAP
GRB2 related adaptor protein.
   
   0.479
NSFL1C
NSFL1 cofactor.
      
 0.474
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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