Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HEPACAMHepatic and glial cell adhesion molecule. (318 aa)    
Predicted Functional Partners:
SPRED1
Sprouty related EVH1 domain containing 1.
      
 0.825
KCNJ10
Potassium inwardly rectifying channel subfamily J member 10.
   
  
 0.721
ENSCAPP00000012988
annotation not available
      
 0.687
GPC3
Glypican 3.
      
 0.678
KIF7
Kinesin family member 7.
      
 0.678
ENSCAPP00000014267
annotation not available
      
 0.675
GALC
Galactosylceramidase.
      
 0.665
AKT3
AKT serine/threonine kinase 3.
      
 0.662
CMTM5
CKLF like MARVEL transmembrane domain containing 5.
   
    0.639
GSE1
Gse1 coiled-coil protein.
      
 0.619
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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