MAGI1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MAGI1

Membrane associated guanylate kinase, WW and PDZ domain containing 1. (1019 aa)

Predicted Functional Partners:

CTNNB1

0.992

ENSCAPP00000017497

0.975

SYNPO

0.968

ACTN4

0.967

ENSCAPP00000016912

0.967

NET1

0.959

ENSCAPP00000010613

0.947

ACTN1

0.944

ENSCAPP00000000177

0.938

ENSCAPP00000001610

0.932

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTN1	ACTN4	ENSCAPP00000001523	ENSCAPP00000007797	Actinin alpha 1.	Actinin alpha 4.	0.999
ACTN1	CTNNB1	ENSCAPP00000001523	ENSCAPP00000013273	Actinin alpha 1.	Catenin beta 1.	0.680
ACTN1	MAGI1	ENSCAPP00000001523	ENSCAPP00000004556	Actinin alpha 1.	Membrane associated guanylate kinase, WW and PDZ domain containing 1.	0.944
ACTN1	SYNPO	ENSCAPP00000001523	ENSCAPP00000014848	Actinin alpha 1.	Synaptopodin.	0.851
ACTN4	ACTN1	ENSCAPP00000007797	ENSCAPP00000001523	Actinin alpha 4.	Actinin alpha 1.	0.999
ACTN4	CTNNB1	ENSCAPP00000007797	ENSCAPP00000013273	Actinin alpha 4.	Catenin beta 1.	0.851
ACTN4	MAGI1	ENSCAPP00000007797	ENSCAPP00000004556	Actinin alpha 4.	Membrane associated guanylate kinase, WW and PDZ domain containing 1.	0.967
ACTN4	SYNPO	ENSCAPP00000007797	ENSCAPP00000014848	Actinin alpha 4.	Synaptopodin.	0.874
CTNNB1	ACTN1	ENSCAPP00000013273	ENSCAPP00000001523	Catenin beta 1.	Actinin alpha 1.	0.680
CTNNB1	ACTN4	ENSCAPP00000013273	ENSCAPP00000007797	Catenin beta 1.	Actinin alpha 4.	0.851
CTNNB1	ENSCAPP00000000177	ENSCAPP00000013273	ENSCAPP00000000177	Catenin beta 1.	annotation not available	0.949
CTNNB1	ENSCAPP00000016912	ENSCAPP00000013273	ENSCAPP00000016912	Catenin beta 1.	annotation not available	0.918
CTNNB1	MAGI1	ENSCAPP00000013273	ENSCAPP00000004556	Catenin beta 1.	Membrane associated guanylate kinase, WW and PDZ domain containing 1.	0.992
ENSCAPP00000000177	CTNNB1	ENSCAPP00000000177	ENSCAPP00000013273	annotation not available	Catenin beta 1.	0.949
ENSCAPP00000000177	ENSCAPP00000016912	ENSCAPP00000000177	ENSCAPP00000016912	annotation not available	annotation not available	0.927
ENSCAPP00000000177	MAGI1	ENSCAPP00000000177	ENSCAPP00000004556	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 1.	0.938
ENSCAPP00000001610	ENSCAPP00000010613	ENSCAPP00000001610	ENSCAPP00000010613	annotation not available	annotation not available	0.811
ENSCAPP00000001610	MAGI1	ENSCAPP00000001610	ENSCAPP00000004556	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 1.	0.932
ENSCAPP00000010613	ENSCAPP00000001610	ENSCAPP00000010613	ENSCAPP00000001610	annotation not available	annotation not available	0.811
ENSCAPP00000010613	MAGI1	ENSCAPP00000010613	ENSCAPP00000004556	annotation not available	Membrane associated guanylate kinase, WW and PDZ domain containing 1.	0.947