Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJAP1Adherens junctions associated protein 1. (400 aa)    
Predicted Functional Partners:
BSG
Basigin (Ok blood group).
      
 0.683
PTPRN
Protein tyrosine phosphatase receptor type N.
   
  
 0.610
SLC44A3
Solute carrier family 44 member 3.
      
 0.581
POC5
POC5 centriolar protein.
      
 0.569
ADARB2
Adenosine deaminase RNA specific B2 (inactive).
   
  
 0.550
EFS
Embryonal Fyn-associated substrate.
      
 0.530
TMEM51
Transmembrane protein 51.
      
 0.517
MORN4
MORN repeat containing 4.
      
 0.454
CPXM1
Carboxypeptidase X, M14 family member 1.
      
 0.454
MTMR11
Myotubularin related protein 11.
      
 0.452
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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