ENSCAPP00000004558 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000004558

annotation not available (223 aa)

Predicted Functional Partners:

TMC8

0.553

ANKFN1

0.547

ITSN2

0.448

ITSN1

0.422

ENSCAPP00000013032

0.422

ENSCAPP00000014552

0.422

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKFN1	ENSCAPP00000004558	ENSCAPP00000003103	ENSCAPP00000004558	Ankyrin repeat and fibronectin type III domain containing 1.	annotation not available	0.547
ENSCAPP00000004558	ANKFN1	ENSCAPP00000004558	ENSCAPP00000003103	annotation not available	Ankyrin repeat and fibronectin type III domain containing 1.	0.547
ENSCAPP00000004558	ENSCAPP00000013032	ENSCAPP00000004558	ENSCAPP00000013032	annotation not available	annotation not available	0.422
ENSCAPP00000004558	ENSCAPP00000014552	ENSCAPP00000004558	ENSCAPP00000014552	annotation not available	annotation not available	0.422
ENSCAPP00000004558	ITSN1	ENSCAPP00000004558	ENSCAPP00000009838	annotation not available	Intersectin 1.	0.422
ENSCAPP00000004558	ITSN2	ENSCAPP00000004558	ENSCAPP00000009309	annotation not available	Intersectin 2.	0.448
ENSCAPP00000004558	TMC8	ENSCAPP00000004558	ENSCAPP00000011158	annotation not available	Transmembrane channel like 8.	0.553
ENSCAPP00000013032	ENSCAPP00000004558	ENSCAPP00000013032	ENSCAPP00000004558	annotation not available	annotation not available	0.422
ENSCAPP00000013032	ITSN1	ENSCAPP00000013032	ENSCAPP00000009838	annotation not available	Intersectin 1.	0.947
ENSCAPP00000013032	ITSN2	ENSCAPP00000013032	ENSCAPP00000009309	annotation not available	Intersectin 2.	0.984
ENSCAPP00000014552	ENSCAPP00000004558	ENSCAPP00000014552	ENSCAPP00000004558	annotation not available	annotation not available	0.422
ITSN1	ENSCAPP00000004558	ENSCAPP00000009838	ENSCAPP00000004558	Intersectin 1.	annotation not available	0.422
ITSN1	ENSCAPP00000013032	ENSCAPP00000009838	ENSCAPP00000013032	Intersectin 1.	annotation not available	0.947
ITSN1	ITSN2	ENSCAPP00000009838	ENSCAPP00000009309	Intersectin 1.	Intersectin 2.	0.985
ITSN2	ENSCAPP00000004558	ENSCAPP00000009309	ENSCAPP00000004558	Intersectin 2.	annotation not available	0.448
ITSN2	ENSCAPP00000013032	ENSCAPP00000009309	ENSCAPP00000013032	Intersectin 2.	annotation not available	0.984
ITSN2	ITSN1	ENSCAPP00000009309	ENSCAPP00000009838	Intersectin 2.	Intersectin 1.	0.985
TMC8	ENSCAPP00000004558	ENSCAPP00000011158	ENSCAPP00000004558	Transmembrane channel like 8.	annotation not available	0.553