Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004558annotation not available (223 aa)    
Predicted Functional Partners:
SCARA3
Scavenger receptor class A member 3.
    
   0.796
TMC8
Transmembrane channel like 8.
      
 0.749
TMC6
Transmembrane channel like 6.
      
 0.691
ANKFN1
Ankyrin repeat and fibronectin type III domain containing 1.
      
 0.651
SCAMP1
Secretory carrier membrane protein 1.
   
 
 0.625
SYNPR
Synaptoporin.
    
 
 0.603
ENSCAPP00000014552
annotation not available
      
 0.571
C17orf67
Chromosome 17 open reading frame 67.
      
 0.571
ENSCAPP00000014634
annotation not available
      
 0.570
TK1
Thymidine kinase 1.
      
 0.531
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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