STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM1Small G protein signaling modulator 1. (991 aa)    
Predicted Functional Partners:
RAB9A
RAB9A, member RAS oncogene family.
    
 
 0.832
ENSCAPP00000002664
annotation not available
     
 0.668
RAB7B
RAB7B, member RAS oncogene family.
    
 
 0.550
SGSM3
Small G protein signaling modulator 3.
      
 0.547
DPYSL4
Dihydropyrimidinase like 4.
      
 0.544
CETN1
Centrin 1.
    
   0.517
ENSCAPP00000002934
annotation not available
    
   0.517
ENSCAPP00000005482
annotation not available
    
   0.517
ANKRD27
Ankyrin repeat domain 27.
     
 0.433
PTPRN
Protein tyrosine phosphatase receptor type N.
   
 
 0.430
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.