STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2LG-patch domain containing 2 like. (351 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein 6.
   
 0.960
DDX18
DEAD-box helicase 18.
    
  0.959
BYSL
Bystin like.
    
 0.959
UTP6
UTP6 small subunit processome component.
    
 0.959
DHX15
DEAH-box helicase 15.
    
 0.946
KRR1
KRR1 small subunit processome component homolog.
    
  0.942
NOP14
NOP14 nucleolar protein.
    
  0.935
ENSCAPP00000001305
annotation not available
    
 0.912
PINX1
PIN2 (TERF1) interacting telomerase inhibitor 1.
    
 
 0.899
UTP25
UTP25 small subunit processor component.
    
   0.892
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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