Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL33Mitochondrial ribosomal protein L33. (51 aa)    
Predicted Functional Partners:
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.995
MRPL13
Mitochondrial ribosomal protein L13.
  
 
 0.993
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.990
ENSCAPP00000013732
annotation not available
  
 
 0.990
MRPS6
Mitochondrial ribosomal protein S6.
  
 
 0.989
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.989
RPS18
Ribosomal protein S18.
  
 
 0.989
MRPL4
Mitochondrial ribosomal protein L4.
  
 
 0.988
MRPL21
Mitochondrial ribosomal protein L21.
  
 
 0.988
ENSCAPP00000016084
annotation not available
  
 0.988
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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