STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD1protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1. (342 aa)    
Predicted Functional Partners:
WDYHV1
WDYHV motif containing 1.
      
 0.550
SCAF11
SR-related CTD associated factor 11.
      
 0.545
PUS7
Pseudouridine synthase 7.
     
 0.497
GART
annotation not available
     
 0.466
ENSCAPP00000012808
annotation not available
  
    0.438
ENSCAPP00000012542
annotation not available
  
  
 0.437
CUL5
Cullin 5.
    
   0.437
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
     
 0.436
ENSCAPP00000010299
annotation not available
      
 0.422
ADSL
Adenylosuccinate lyase.
  
  
 0.400
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.