Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004582annotation not available (371 aa)    
Predicted Functional Partners:
ENSCAPP00000007564
annotation not available
  
 0.999
PNN
Pinin, desmosome associated protein.
   
 0.997
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
  0.996
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.983
CASC3
CASC3 exon junction complex subunit.
   
  0.981
ENSCAPP00000010970
annotation not available
    
 0.981
RBM8A
RNA binding motif protein 8A.
   
  0.981
ERH
ERH mRNA splicing and mitosis factor.
   
 
 0.978
MED1
Mediator complex subunit 1.
   
 0.975
SNIP1
Smad nuclear interacting protein 1.
    
 
 0.960
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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