UVSSA protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UVSSA

UV stimulated scaffold protein A. (667 aa)

Predicted Functional Partners:

USP7

0.995

ENSCAPP00000006310

0.969

LEO1

0.939

ERCC6

0.899

ENSCAPP00000002475

0.896

USP40

0.867

DDB1

0.834

CUL4A

0.790

ENSCAPP00000001157

0.788

WDR61

0.759

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL4A	DDB1	ENSCAPP00000005380	ENSCAPP00000009314	Cullin 4A.	Damage specific DNA binding protein 1.	0.999
CUL4A	ENSCAPP00000001157	ENSCAPP00000005380	ENSCAPP00000001157	Cullin 4A.	annotation not available	0.884
CUL4A	ENSCAPP00000006310	ENSCAPP00000005380	ENSCAPP00000006310	Cullin 4A.	annotation not available	0.996
CUL4A	ERCC6	ENSCAPP00000005380	ENSCAPP00000015060	Cullin 4A.	ERCC excision repair 6, chromatin remodeling factor.	0.945
CUL4A	LEO1	ENSCAPP00000005380	ENSCAPP00000016497	Cullin 4A.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.860
CUL4A	USP7	ENSCAPP00000005380	ENSCAPP00000002899	Cullin 4A.	Ubiquitin specific peptidase 7.	0.440
CUL4A	UVSSA	ENSCAPP00000005380	ENSCAPP00000004594	Cullin 4A.	UV stimulated scaffold protein A.	0.790
CUL4A	WDR61	ENSCAPP00000005380	ENSCAPP00000005256	Cullin 4A.	WD repeat domain 61.	0.902
DDB1	CUL4A	ENSCAPP00000009314	ENSCAPP00000005380	Damage specific DNA binding protein 1.	Cullin 4A.	0.999
DDB1	ENSCAPP00000001157	ENSCAPP00000009314	ENSCAPP00000001157	Damage specific DNA binding protein 1.	annotation not available	0.939
DDB1	ENSCAPP00000002475	ENSCAPP00000009314	ENSCAPP00000002475	Damage specific DNA binding protein 1.	annotation not available	0.710
DDB1	ENSCAPP00000006310	ENSCAPP00000009314	ENSCAPP00000006310	Damage specific DNA binding protein 1.	annotation not available	0.999
DDB1	ERCC6	ENSCAPP00000009314	ENSCAPP00000015060	Damage specific DNA binding protein 1.	ERCC excision repair 6, chromatin remodeling factor.	0.984
DDB1	LEO1	ENSCAPP00000009314	ENSCAPP00000016497	Damage specific DNA binding protein 1.	LEO1 homolog, Paf1/RNA polymerase II complex component.	0.989
DDB1	USP7	ENSCAPP00000009314	ENSCAPP00000002899	Damage specific DNA binding protein 1.	Ubiquitin specific peptidase 7.	0.597
DDB1	UVSSA	ENSCAPP00000009314	ENSCAPP00000004594	Damage specific DNA binding protein 1.	UV stimulated scaffold protein A.	0.834
DDB1	WDR61	ENSCAPP00000009314	ENSCAPP00000005256	Damage specific DNA binding protein 1.	WD repeat domain 61.	0.901
ENSCAPP00000001157	CUL4A	ENSCAPP00000001157	ENSCAPP00000005380	annotation not available	Cullin 4A.	0.884
ENSCAPP00000001157	DDB1	ENSCAPP00000001157	ENSCAPP00000009314	annotation not available	Damage specific DNA binding protein 1.	0.939
ENSCAPP00000001157	ENSCAPP00000002475	ENSCAPP00000001157	ENSCAPP00000002475	annotation not available	annotation not available	0.985