Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCN4Cellular communication network factor 4. (367 aa)    
Predicted Functional Partners:
NDRG1
N-myc downstream regulated 1.
   
  
 0.583
ENSCAPP00000004478
annotation not available
      
 0.570
WNT10B
Wnt family member 10B.
      
 0.567
CCN2
Cellular communication network factor 2.
     
  0.506
CCN1
Cellular communication network factor 1.
     
  0.506
CTNNB1
Catenin beta 1.
    
 
 0.491
RYK
Receptor like tyrosine kinase.
      
 0.478
WNT2
Wnt family member 2.
   
  
 0.469
CCND1
Cyclin D1.
   
  
 0.444
PTK7
Protein tyrosine kinase 7 (inactive).
      
 0.444
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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