STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKCEProtein kinase C epsilon. (545 aa)    
Predicted Functional Partners:
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta.
    
  0.948
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
  
 
0.906
RRAS
RAS related.
    
 0.873
RRAS2
RAS related 2.
    
 0.870
MRAS
Muscle RAS oncogene homolog.
    
 0.870
PRKCG
Protein kinase C gamma.
  
 
0.849
ENSCAPP00000000802
annotation not available
    
 0.848
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 0.848
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.848
MAPK10
Mitogen-activated protein kinase 10.
    
  0.840
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.