STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4BSemaphorin 4B. (809 aa)    
Predicted Functional Partners:
SEMA4C
Semaphorin 4C.
    
 0.949
ENSCAPP00000004294
annotation not available
    
 0.939
PLXNB1
Plexin B1.
    
 0.934
PLXNB3
Plexin B3.
    
 0.934
SEMA4D
Semaphorin 4D.
    
  0.922
SEMA4G
Semaphorin 4G.
    
 0.918
SEMA4A
Semaphorin 4A.
     
  0.841
SEMA4F
Ssemaphorin 4F.
    
 0.834
ENSCAPP00000015944
annotation not available
    
 0.761
GIPC1
GIPC PDZ domain containing family member 1.
    
 
 0.711
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.