Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004611annotation not available (136 aa)    
Predicted Functional Partners:
ACTB
Actin beta.
 
     0.920
ARPC2
Actin related protein 2/3 complex subunit 2.
   
 0.886
CFL2
Cofilin 2.
   
 0.880
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.878
ENSCAPP00000001703
annotation not available
    
 0.862
ENSCAPP00000012474
annotation not available
 
     0.862
ARPC5
Actin related protein 2/3 complex subunit 5.
    
 0.861
PFN4
Profilin family member 4.
   
 0.859
TNNI3
Troponin I3, cardiac type.
   
 0.858
ACTL6A
Actin like 6A.
    
 0.856
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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