STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPRASRP receptor subunit alpha. (590 aa)    
Predicted Functional Partners:
SRP54
Signal recognition particle 54.
  
 0.998
SRP72
Signal recognition particle 72.
   
 0.978
SRP68
Signal recognition particle 68.
   
 0.977
RPL5
Ribosomal protein L5.
   
 
 0.974
ENSCAPP00000013443
annotation not available
   
 
 0.969
SEC61A1
SEC61 translocon alpha 1 subunit.
  
 0.952
SEC61A2
SEC61 translocon alpha 2 subunit.
  
 0.952
RPL23
Ribosomal protein L23.
   
 
 0.949
RPL35
Ribosomal protein L35.
   
 
 0.941
ENSCAPP00000007108
annotation not available
  
 
 0.930
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.