Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004616annotation not available (174 aa)    
Predicted Functional Partners:
ENSCAPP00000005614
annotation not available
    
 0.999
CLCN6
Chloride voltage-gated channel 6.
    
 0.980
TRABD
TraB domain containing.
      
 0.939
QTRT1
Queuine tRNA-ribosyltransferase catalytic subunit 1.
      
 0.892
WDYHV1
WDYHV motif containing 1.
      
 0.892
ENSCAPP00000016972
annotation not available
      
 0.885
TCIRG1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3.
      
 0.875
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.865
QPCTL
Glutaminyl-peptide cyclotransferase like.
   
  
 0.809
CLCN1
Chloride voltage-gated channel 1.
   
 0.805
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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