Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUVBL2RuvB like AAA ATPase 2. (486 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
   
 0.999
ENSCAPP00000009319
annotation not available
   
 0.999
RPAP3
RNA polymerase II associated protein 3.
    
 0.999
ACTL6A
Actin like 6A.
   
 0.999
PIH1D1
PIH1 domain containing 1.
   
 0.999
EPC1
Enhancer of polycomb homolog 1.
    
 0.998
ENSCAPP00000005504
annotation not available
    
 0.998
EP400
E1A binding protein p400.
    
 0.998
PFDN2
Prefoldin subunit 2.
   
 0.998
ENSCAPP00000012750
annotation not available
    
 0.998
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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