STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC12Trafficking protein particle complex 12. (797 aa)    
Predicted Functional Partners:
TRAPPC11
Trafficking protein particle complex 11.
   
 0.998
ENSCAPP00000017935
annotation not available
    
 0.998
TRAPPC6A
Trafficking protein particle complex 6A.
    
 0.997
TRAPPC13
Trafficking protein particle complex 13.
    
 0.997
TRAPPC1
Trafficking protein particle complex 1.
    
 0.997
TRAPPC2L
Trafficking protein particle complex 2 like.
    
 0.997
TRAPPC5
Trafficking protein particle complex 5.
    
 0.996
TRAPPC9
Trafficking protein particle complex 9.
   
 0.992
ENSCAPP00000011394
annotation not available
    
 0.991
ENSCAPP00000007397
annotation not available
    
 0.984
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.