STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF319Zinc finger protein 319. (582 aa)    
Predicted Functional Partners:
JOSD1
Josephin domain containing 1.
      
 0.685
ENSCAPP00000003820
annotation not available
      
 0.569
ENSCAPP00000007277
annotation not available
      
 0.569
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
 0.549
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
    
 0.546
UBA2
Ubiquitin like modifier activating enzyme 2.
    
 0.517
GART
annotation not available
     
  0.505
BARD1
BRCA1 associated RING domain 1.
    
 0.484
SPOPL
Speckle type BTB/POZ protein like.
   
  0.453
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.