STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOL4Nucleolar protein 4. (509 aa)    
Predicted Functional Partners:
ENSCAPP00000015419
annotation not available
    
   0.938
TEX9
Testis expressed 9.
    
   0.935
ENSCAPP00000007369
annotation not available
    
   0.812
FBXL13
F-box and leucine rich repeat protein 13.
   
 
 0.705
ENSCAPP00000004124
annotation not available
   
 0.638
LCORL
Ligand dependent nuclear receptor corepressor like.
    
 
 0.612
ENSCAPP00000006113
annotation not available
      
 0.609
FAM118A
Family with sequence similarity 118 member A.
      
 0.568
KCMF1
Potassium channel modulatory factor 1.
      
 0.567
BIRC7
Baculoviral IAP repeat containing 7.
      
 0.563
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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